Web Directory

» ANISEED
   The Ascidian Network for in Situ Experiment and Embryological Data is a generic system designed to offer a representation of ascidian embryonic development at the level of the genome, of the cell or of the whole embryo.
   http://crfb.univ-mrs.fr/aniseed/

» BioGPS
   Portal accessing third-party sources of gene expression, function and structure, for user-personalized reporting. Maintained by Genomics Institute of the Novartis Research Foundation.
   http://biogps.gnf.org/

» EURExpress II
   A transcriptome-wide atlas database for the developing mouse embryo established by RNA in situ hybridization.
   http://www.eurexpress.org/

» Entrez Genome Database
   A tool for scientists and researchers. Provides views for a variety of genomes, complete chromosomes, sequence maps with contigs, and integrated genetic and physical maps.
   http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Genome

» FlyMine
   An integrated database of genomic, expression and protein data for Drosophila and Anopheles.
   http://www.flymine.org

» GenomeSeek
   A fully-searchable database to provide information and easy access to over 200 current and completed genome projects.
   http://genamics.com/genomes/

» Gramene: A comparative genomic resource for grains
   Gramene is a curated, open-source data resource that provides agricultural researchers and plant breeders with biological and genomic information on rice and other grasses.
   http://www.gramene.org

» HCNetDat
   DNA microarray gene annotation database.
   http://www.stjuderesearch.org/hcnetdat/

» Human Ageing Genomic Resources
   A collection of databases and tools designed to help researchers understand the genetics of human ageing.
   http://genomics.senescence.info/

» Human Genome Sequencing Center
   Provides direct access to the data computed on several organisms such as Rat, Mouse, Drosophila, and Bovine as it relates to human genome sequencing.
   http://www.hgsc.bcm.tmc.edu/

» Knock Out Rat Consortium
   Resource formed by individuals and institutions for development of knockout rats using different technologies. Includes classification, applications, FAQ, forum and member login.
   http://www.knockoutrat.org/

» Maize Genome Assembly Project
   Iowa State University provides an assembly of the maize genome for download and tools for searching and viewing the assembly online.
   http://www.plantgenomics.iastate.edu/maize/

» MaizeGDB
   MaizeGDB is the community database for biological information about the crop plant Zea mays.
   http://www.maizegdb.org/

» Mouse Genome Informatics
   This site contains information on mouse genetic markers, mapping, phenotypes, mammalian homology and gene expression. All data are searchable through a set of Query Forms.
   http://www.informatics.jax.org/

» Other Species Genome Databases and Servers
   A useful list of resources.
   http://animalscience.ucdavis.edu/LivestockBiotechnology/other_species_genome_databases.htm

» Pedant
   Offers analysis of protein sequence sets from individual sequences to complete genomes.
   http://pedant.gsf.de/

» PhenomicDB
   PhenomicDB is a multi-organism phenotype/genotype database. Users can compare the phenotypes of a gene over many organisms simultaneously.
   http://www.phenomicdb.de

» Rat Genome Database
   Contains rat genomic data such as genes, SSLPs, ESTs, QTLs, and strain information and tools such as vcmap, genome scanner, rhmap server, metagene. Also has a rat research community forum.
   http://rgd.mcw.edu/

» SOL Genomics Network
   Integrated clade oriented genome database for the Solanaceae (tomato, potato, pepper, eggplant etc.) and other Asterids. Contains genetic maps, gene sequences, phenotypic descriptions and images, tomato genome sequence and gene annotations.
   http://sgn.cornell.edu

» Saccharomyces Genome Database
   Resource for genomic information on yeast, with tutorial on gene ontology, homology searches and comparisons. Includes links to tools, related conferences, and staff at Stanford University School of Medicine, California.
   http://www.yeastgenome.org/

» Saccharopolyspora erythraea genome
   Website for S. erythraea NRRL23338 genome sequencing project.
   http://131.111.43.95/

» X:Map Genome Browser
   An interactive genome browser supporting multiple species. X:Map displays mapping between Affymetrix Exon Arrays and their corresponding genes and exons.
   http://xmap.picr.man.ac.uk