Web Directory

» CMD Bioscience
   Specialists in the use of computational methods to model and engineer protein-protein interactions. The "Affinity" algorithm is designed to predict protein-protein binding affinities and is free for academic users.
   http://www.cmdbioscience.com

» Calculation of Protein Isoelectric Point
   Tool for the online estimation of protein isoelectric points, or download a free program to calculate pI.
   http://isoelectric.ovh.org

» Global Range Molecular Matching
   GRAMM, a program for modeling docking for enzymology and receptor interactions of hormones and drugs. Includes web server and free download options maintained at the University of Kansas, Lawrence.
   http://vakser.bioinformatics.ku.edu//resources/gramm/

» HOPPscore
   Application for evaluating the structural quality of theoretical or experimental protein structures. Proteins are evaluated by comparing short fragments of structure to a reference dictionary of fragments from high resolution structures.
   http://hoppscore.lbl.gov

» bioYALP: For Biologists, Yet Another Lipoprotein Predictor
   Bioinformatics tool for lipoprotein prediction which is able to analyse protein sequences or a proteome and list possible lipoproteins. It has been tested on bacteria.
   http://destroyedv3.free.fr/yalp/